| ID | Z-score | Known | Upstream promoter |
Gene |
1 | b4119 | -9.279 |    |    | alpha-galactosidase (melA) |
2 | b2019 | -7.560 | ATP phosphoribosyltransferase (hisG) | ||
3 | b3828 | -7.143 |    |    | regulator for metE and metH (metR) |
4 | b3543 | -7.009 |    |    | dipeptide transport system permease protein 1 (dppB) |
5 | b4118 | -6.911 |    |    | regulator of melibiose operon (melR) |
6 | b2425 | -6.168 |    | thiosulfate binding protein (cysP) | |
7 | b0560 | -5.838 |    | bacteriophage DNA packaging protein (nohB) | |
8 | b4385 | -5.755 |    |    | hypothetical protein (yjjJ) |
9 | b3866 | -5.703 |    |    | hypothetical protein (yihI) |
10 | b0689 | -5.697 |    |    | putative pectinase (ybfP) |
11 | b1548 | -5.638 |    | homolog of Qin prophage packaging protein NU1 (nohA) | |
12 | b1825 | -5.573 |    | hypothetical protein | |
13 | b0611 | -5.528 |    |    | RNase I, cleaves phosphodiester bond between any two nucleotides (rna) |
14 | b2622 | -5.470 |    |    | prophage CP4-57 integrase (intA) |
15 | b3066 | -5.002 |    |    | DNA biosynthesis; DNA primase (dnaG) |
16 | b0654 | -4.844 |    |    | glutamate/aspartate transport system permease (gltJ) |
17 | b1978 | -4.772 |    | putative factor | |
18 | b3767 | -4.529 |    | acetolactate synthase II, large subunit, cryptic, interrupted (ilvG_1) | |
19 | b2119 | -4.518 |    | hypothetical protein (yehL) | |
20 | b2792 | -4.444 |    |    | hypothetical protein |
21 | b0902 | -4.443 |    | pyruvate formate lyase activating enzyme 1 (pflA) | |
22 | b3871 | -4.352 |    | putative GTP-binding factor (yihK) | |
23 | b2937 | -4.347 |    | agmatinase (speB) | |
24 | b0939 | -4.300 |    |    | putative chaperone (ycbR) |
25 | b1431 | -4.280 |    | hypothetical protein | |
26 | b0890 | -4.275 |    |    | cell division protein (ftsK) |
27 | b2632 | -4.177 |    | putative GTP-binding protein (yfjP) | |
28 | b0048 | -4.168 |    | dihydrofolate reductase type I (folA) | |
29 | b0336 | -4.133 |    |    | cytosine permease/transport (codB) |
30 | b2517 | -4.076 |    | hypothetical protein (yfgB) | |
31 | b3438 | -4.018 |    |    | regulator of gluconate (gnt) operon (gntR) |
32 | b2599 | -3.945 | chorismate mutase-P and prephenate dehydratase (pheA) | ||
33 | b3671 | -3.923 | acetolactate synthase I, valine-sensitive, large subunit (ilvB) | ||
34 | b2775 | -3.907 |    | putative transport protein (yqcE) | |
35 | b2609 | -3.891 |    | 30S ribosomal subunit protein S16 (rpsP) | |
36 | b3181 | -3.889 |    |    | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (greA) |
37 | b3983 | -3.861 |    | 50S ribosomal subunit protein L11 (rplK) | |
38 | b3722 | -3.823 |    | PTS beta-glucosides enzyme II, cryptic (bglF) | |
39 | b0002 | -3.788 | aspartokinase I, homoserine dehydrogenase I (thrA) | ||
40 | b0196 | -3.759 |    |    | regulator in colanic acid synthesis; interacts with RcsB (rcsF) |
41 | b0007 | -3.711 |    |    | inner membrane transport protein (yaaJ) |
42 | b3513 | -3.694 |    |    | putative membrane protein (yhiU) |
43 | b3088 | -3.669 |    | putative transport protein (ygjT) | |
44 | b4178 | -3.630 |    | hypothetical protein (yjeB) | |
45 | b3752 | -3.573 |    | ribokinase (rbsK) | |
46 | b2643 | -3.572 |    |    | hypothetical protein (yfjX) |
47 | b0074 | -3.559 | 2-isopropylmalate synthase (leuA) | ||
48 | b2096 | -3.530 |    | tagatose-bisphosphate aldolase 1 (gatY) | |
49 | b0170 | -3.506 | elongation factor EF-Ts (tsf) | ||
50 | b0610 | -3.506 |    | regulator of nucleoside diphosphate kinase (rnk) | |
51 | b3813 | -3.503 |    | DNA-dependent ATPase I and helicase II (uvrD) | |
52 | b1851 | -3.446 |    |    | 6-phosphogluconate dehydratase (edd) |
53 | b2359 | -3.395 |    | hypothetical protein | |
54 | b4245 | -3.387 |    | aspartate carbamoyltransferase, catalytic subunit (pyrB) | |
55 | b4377 | -3.374 |    | hypothetical protein (yjjU) | |
56 | b3298 | -3.362 |    | 30S ribosomal subunit protein S13 (rpsM) | |
57 | b0606 | -3.358 |    |    | alkyl hydroperoxide reductase, F52a subunit (ahpF) |
58 | b0018 | -3.350 |    | Gef protein interferes with membrane function when in excess (gef) | |
59 | b2958 | -3.329 |    |    | hypothetical protein (yggN) |
60 | b3822 | -3.303 |    |    | ATP-dependent DNA helicase (recQ) |
61 | b0241 | -3.292 |    |    | outer membrane pore protein E (phoE) |
62 | b0680 | -3.260 |    |    | glutamine tRNA synthetase (glnS) |
63 | b0404 | -3.233 |    |    | putative glycoprotein (yajB) |
64 | b3337 | -3.232 |    | hypothetical protein (yheA) | |
65 | b3190 | -3.181 |    |    | hypothetical protein (yrbA) |
66 | b0860 | -3.147 |    |    | arginine 3rd transport system periplasmic binding protein (artJ) |
67 | b1922 | -3.115 |    | flagellar biosynthesis; regulation of flagellar operons (fliA) | |
68 | b2836 | -3.103 |    |    | 2-acyl-glycerophospho-ethanolamine acyltransferase; acyl-acyl-carrier protein synthetase (aas) |
69 | b3915 | -3.087 |    |    | putative transport system permease protein (yiiP) |
70 | b3310 | -3.083 |    | 50S ribosomal subunit protein L14 (rplN) | |
71 | b0119 | -3.018 |    |    | hypothetical protein (yacL) |
72 | b3748 | -3.005 |    |    | D-ribose high-affinity transport system; membrane-associated protein (rbsD) |
73 | b2313 | -2.990 |    | membrane protein required for colicin V production (cvpA) | |
74 | b1352 | -2.967 |    | hypothetical protein (ydaD) | |
75 | b0441 | -2.961 |    |    | putative protease maturation protein (ybaU) |
76 | b3161 | -2.947 |    |    | tryptophan-specific transport protein (mtr) |
77 | b1614 | -2.888 |    | hypothetical protein (ydgA) | |
78 | b3528 | -2.862 |    | uptake of C4-dicarboxylic acids (dctA) | |
79 | b2514 | -2.812 |    | histidine tRNA synthetase (hisS) | |
80 | b3390 | -2.810 |    | shikimate kinase I (aroK) | |
81 | b1253 | -2.808 |    |    | hypothetical protein (yciA) |
82 | b2724 | -2.808 |    | probable small subunit of hydrogenase-3, iron-sulfur protein (part of formate hydrogenlyase (FHL) complex) (hycB) | |
83 | b4242 | -2.806 |    |    | Mg2+ transport ATPase, P-type 1 (mgtA) |
84 | b0208 | -2.804 |    |    | putative transcriptional regulator LYSR-type (yafC) |
85 | b1479 | -2.790 |    | NAD-linked malate dehydrogenase (malic enzyme) (sfcA) | |
86 | b1838 | -2.749 |    | protein phosphatase 1 modulates phosphoproteins, signals protein misfolding (pphA) | |
87 | b0189 | -2.741 |    | hypothetical protein (yaeO) | |
88 | b1264 | -2.717 |    | anthranilate synthase component I (trpE) | |
89 | b4313 | -2.706 |    | recombinase involved in phase variation; regulator for fimA (fimE) | |
90 | b3573 | -2.691 |    |    | hypothetical protein (yiaI) |
91 | b3642 | -2.675 |    | orotate phosphoribosyltransferase (pyrE) | |
92 | b0034 | -2.646 |    | transcriptional regulator of cai operon (caiF) | |
93 | b2176 | -2.635 |    |    | hypothetical protein (rtn) |
94 | b1769 | -2.618 |    |    | putative transport protein (ydjE) |
95 | b1561 | -2.605 |    |    | hypothetical protein (rem) |
96 | b1050 | -2.605 |    |    | hypothetical protein (yceK) |
97 | b2643 | -2.604 |    |    | hypothetical protein (yfjX) |
98 | b0248 | -2.604 |    |    | hypothetical protein (yafX) |
99 | b4278 | -2.591 |    | IS4 hypothetical protein (yi41) | |
100 | b3560 | -2.583 |    |    | glycine tRNA synthetase, alpha subunit (glyQ) |
101 | b3723 | -2.565 | positive regulation of bgl operon (bglG) | ||
102 | b1689 | -2.560 |    | hypothetical protein | |
103 | b3632 | -2.528 |    | lipopolysaccharide core biosynthesis (rfaQ) | |
104 | b1404 | -2.521 |    | IS30 transposase (tra8_2) | |
105 | b2014 | -2.519 |    | putative amino acid/amine transport protein (yeeF) | |
106 | b2924 | -2.487 |    |    | putative transport protein (yggB) |
107 | b0070 | -2.433 |    | putative transport protein (yabM) | |
108 | b4037 | -2.409 |    | periplasmic protein of mal regulon (malM) | |
109 | b2359 | -2.405 |    |    | hypothetical protein |
110 | b3571 | -2.393 |    | alpha-amylase (malS) | |
111 | b4082 | -2.370 |    |    | putative membrane protein (yjcR) |
112 | b0174 | -2.360 |    | hypothetical protein (yaeS) | |
113 | b4392 | -2.359 |    |    | soluble lytic murein transglycosylase (slt) |
114 | b2938 | -2.347 |    | biosynthetic arginine decarboxylase (speA) | |
115 | b2443 | -2.331 |    | hypothetical protein | |
116 | b4090 | -2.296 |    | ribose 5-phosphate isomerase B (rpiB) | |
117 | b2140 | -2.289 |    | putative regulator protein (yohI) | |
118 | b1861 | -2.274 |    | Holliday junction helicase subunit B (ruvA) | |
119 | b3196 | -2.274 |    | hypothetical protein (yrbG) | |
120 | b3054 | -2.268 |    |    | hypothetical protein (ygiF) |
121 | b1761 | -2.252 |    |    | NADP-specific glutamate dehydrogenase (gdhA) |
122 | b0763 | -2.248 |    | molybdate-binding periplasmic protein; permease (modA) | |
123 | b0909 | -2.234 |    |    | putative heat shock protein (ycaL) |
124 | b3954 | -2.233 |    | putative ARAC-type regulatory protein (yijO) | |
125 | b3440 | -2.232 |    | putative regulator (yhhX) | |
126 | b3074 | -2.225 |    |    | putative tRNA synthetase (ygjH) |
127 | b0605 | -2.218 |    | alkyl hydroperoxide reductase, C22 subunit; detoxification of hydroperoxides (ahpC) | |
128 | b1053 | -2.218 |    |    | putative transport protein (yceE) |
129 | b1284 | -2.210 |    | putative DEOR-type transcriptional regulator | |
130 | b0068 | -2.206 |    |    | thiamin-binding periplasmic protein (tbpA) |
131 | b0681 | -2.204 |    |    | hypothetical protein (ybfM) |
132 | b2150 | -2.158 |    | galactose-binding transport protein; receptor for galactose taxis (mglB) | |
133 | b3349 | -2.153 |    | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) (slyD) | |
134 | b2298 | -2.148 |    |    | putative S-transferase (yfcC) |
135 | b0554 | -2.133 |    | hypothetical protein (ybcR) | |
136 | b1778 | -2.121 |    |    | hypothetical protein (yeaA) |
137 | b1829 | -2.092 |    | heat shock protein, integral membrane protein (htpX) | |
138 | b2685 | -2.084 |    |    | multidrug resistance secretion protein (emrA) |
139 | b2456 | -2.069 |    |    | detox protein (cchB) |
140 | b4284 | -2.067 |    | IS30 transposase (tra8_3) | |
141 | b1002 | -2.064 |    | periplasmic glucose-1-phosphatase (agp) | |
142 | b0854 | -2.059 |    | periplasmic putrescine-binding protein; permease protein (potF) | |
143 | b1368 | -2.051 |    |    | putative alpha helix protein |
144 | b3088 | -2.048 |    | putative transport protein (ygjT) | |
145 | b0347 | -2.019 |    | 3-(3-hydroxyphenyl)propionate hydroxylase (mhpA) | |
146 | b1663 | -2.018 |    | putative transport protein (ydhE) |