SHOT - Shared Ortholog and Gene Order Tree Reconstruction Tool

SHOT Shared Ortholog and Gene Order Tree Reconstruction Tool
Reference: J. O. Korbel, B. Snel, M. A. Huynen, and P. Bork, (2002) SHOT: a web server for the construction of genome phylogenies. Trends Genet. 18:158-162.

Please visit the updated version with 110 genomes...

Shot is a web-based tool for the reconstruction of genome phylogenies. See the documentation for more information. In order to use this tool, you must enable JavaScript in your browser. Reconstruction method selected: Gene Content Phylogeny.

Reconstruction method:
Species:
Output format:	Graphical [without bootstrapping] Newick format including bootstrap values

Advanced Input Parameters:

Normalization value:
Genome size definition:
Distance measure:
Clustering algorithm:

SHOT Phylogeny

Organism Selection:

EUBACTERIA

A. aeolicus
B. burgdorferi
B. halodurans
B. subtilis
Buchnera
C. crescentus
C. jejuni
C. muridarum
C. pneumoniae CWLO29
C. pneumoniae AR39
C. trachomatis
D. radiodurans
E. coli K12
E. coli O157:H7
H. influenzae
H. pylori 26695
H. pylori J99
L. lactis
M. genitalium
M. leprae
M. loti
M. pneumoniae
M. pulmonis
M. tuberculosis
N. meningitidis serogroup A
N. meningitidis serogroup B
P. multocida
P. aeruginosa
R. prowazekii
S. aureus Mu50
S. aureus N135
S. pyogenes
Synechocystis
T. maritima
T. pallidum
U. urealyticum
V. cholerae
X. fastidiosa

ARCHAEA

A. fulgidus
A. pernix
Halobacterium
M. jannaschii
M. thermoautotrophicum
P. abyssi
P. horikoshii
P. furiosus
T. acidophilum
S. solfataricus

EUKARYOTAE

A. thaliana
C. albicans
C. elegans
D. melanogaster
H. sapiens
S. cerevisiae
S. pombe